Fig. 5
From: One-step diagnosis of infection and lung cancer using metagenomic sequencing
Characteristics of BALF microbiome and its clinical relevance with lung cancer staging. A Relative abundance of top50 bacteria, top15 fungi and all viruses in each group of LC_H and LC_L. (B), (D) and (G) showed alpha diversities of bacteria, fungi and viruses identified in different stages of LC, SCC and ADC, respectively. C and E are specifically enriched microorganisms identified in LC_H and SCC_L. Data were analyzed using LEfSe with the LDA threshold = 2. F Clinical relevance of microorganisms specifically enriched in SCC_L with certain clinical parameters. pink: positive correlation; purple: negative correlation. The darker the color, the stronger the correlation. *** represents p < 0.001