Skip to main content

Table 2 Functional classification of differentially expressed genes between the virus (Wuhan) infected only and the virus infected in the presence of MKGaA#49

From: Optimization of a micro-scale air–liquid-interface model of human proximal airway epithelium for moderate throughput drug screening for SARS-CoV-2

Annotation cluster 1

Enrichment Score: 9.7

Count

P_Values

Benjamini

UP_KW_BIOLOGICAL_PROCESS

Antiviral defense

13

1.10E−15

2.70E−14

GOTERM_BP_DIRECT

Defense response to virus

14

2.00E−15

7.70E−13

GOTERM_BP_DIRECT

Response to virus

11

3.80E−14

7.50E−12

GOTERM_BP_DIRECT

Negative regulation of viral genome replication

9

7.30E−14

9.60E−12

UP_KW_BIOLOGICAL_PROCESS

Innate immunity

13

4.50E−10

5.60E−09

UP_KW_BIOLOGICAL_PROCESS

Immunity

14

5.30E−07

4.40E−06

GOTERM_BP_DIRECT

Innate immune response

10

6.90E−06

5.40E−04

GOTERM_MF_DIRECT

RNA binding

6

2.80E−01

1.00E + 00

Annotation cluster 2

Enrichment score: 5.63

Count

P_Values

Benjamini

KEGG_PATHWAY

Influenza A

8

2.00E−07

1.60E−05

KEGG_PATHWAY

Hepatitis C

7

2.60E−06

1.00E−04

KEGG_PATHWAY

Coronavirus disease—COVID-19

7

2.40E−05

6.40E−04

Annotation cluster 3

Enrichment score: 3.72

Count

P_Values

Benjamini

GOTERM_CC_DIRECT

Cornified envelope

7

4.10E−09

2.70E−07

GOTERM_BP_DIRECT

Keratinocyte differentiation

6

3.20E−07

3.20E−05

INTERPRO

Cornifin (SPRR1)

3

1.50E−05

1.70E−03

GOTERM_BP_DIRECT

Epidermis development

5

3.70E−05

2.20E−03

GOTERM_BP_DIRECT

Peptide cross-linking

4

4.00E−05

2.20E−03

GOTERM_BP_DIRECT

Keratinization

5

4.70E−05

2.30E−03